November/December 2011
Volume 8, Issue 6
Pages 935 - 1187
 Issue Catalogue (MARC XML)
Animal snoRNAs and scaRNAs with exceptional structures
  Manja Marz, Andreas R. Gruber, Christian Höner zu Siederdissen, Fabian Amman, Stefan Badelt, Sebastian Bartschat, Stephan H. Bernhart, Wolfgang Beyer, Stephanie Kehr, Ronny Lorenz, Andrea Tanzer, Dilmurat Yusuf, Hakim Tafer, Ivo L. Hofacker and Peter F. Stadler
   Pages 938 - 946
  http://dx.doi.org/10.4161/rna.8.6.16603
Abstract  View Article
sRNA-Xcc1, an integron-encoded transposon- and plasmid-transferred trans-acting sRNA, is under the positive control of the key virulence regulators HrpG and HrpX of Xanthomonas campestris pathovar campestris
  Xiao-Lin Chen, Dong-Jie Tang, Rui-Ping Jiang, Yong-Qiang He, Bo-Le Jiang, Guang-Tao Lu and Ji-Liang Tang
   Pages 947 - 953
  http://dx.doi.org/10.4161/rna.8.6.16690
Abstract  View Article
Alternative splicing at the right time
  Sabrina E. Sanchez, Ezequiel Petrillo, Alberto R. Kornblihtt and Marcelo J. Yanovsky
   Pages 954 - 959
  http://dx.doi.org/10.4161/rna.8.6.17336
Abstract  View Article
Posttranscriptional regulation of miRNAs in the DNA damage response
  Xinna Zhang and Xiongbin Lu
   Pages 960 - 963
  http://dx.doi.org/10.4161/rna.8.6.17337
Abstract  View Article
Transcriptional activators enhance polyadenylation of mRNA precursors
  Takashi Nagaike and James L. Manley
   Pages 964 - 967
  http://dx.doi.org/10.4161/rna.8.6.17210
Abstract  View Article
RNA splicing control: Yet another gene regulatory role for long nuclear noncoding RNAs
  Xinying Zong, Vidisha Tripathi and Kannanganattu V. Prasanth
   Pages 968 - 977
  http://dx.doi.org/10.4161/rna.8.6.17606
Abstract  View Article
Designer RNA-binding proteins: New tools for manipulating the transcriptome
  Aleksandra Filipovska and Oliver Rackham
   Pages 978 - 983
  http://dx.doi.org/10.4161/rna.8.6.17907
Abstract  View Article
RNA meets disease in paradise
  Julia Winter, Anna Roth and Sven Diederichs
   Pages 984 - 987
  http://dx.doi.org/10.4161/rna.8.6.18298
Abstract  View Article
Highly accurate and high-resolution function prediction of RNA binding proteins by fold recognition and binding affinity prediction
  Huiying Zhao, Yuedong Yang and Yaoqi Zhou
   Pages 988 - 996
  http://dx.doi.org/10.4161/rna.8.6.17813
Abstract  View Article
A natural fast-cleaving branching ribozyme from the amoeboflagellate Naegleria pringsheimi
  Yunjia Tang, Henrik Nielsen, Åsa Birna Birgisdottir and Steinar Johansen
   Pages 997 - 1004
  http://dx.doi.org/10.4161/rna.8.6.16027
Abstract  View Article
Micro RNA -214,-150,-146a and-125b target Huntingtin gene
  Mithun Sinha, Jayeeta Ghose and Nitai P. Bhattarcharyya
   Pages 1005 - 1021
  http://dx.doi.org/10.4161/rna.8.6.16035
Abstract  View Article
Upregulation of RNase E activity by mutation of a site that uncompetitively interferes with RNA binding
  Hayoung Go, Christopher J. Moore, Minho Lee, Eunkyoung Shin, Che Ok Jeon, Chang-Jun Cha, Seung Hyun Han, Su-Jin Kim, Sang-Won Lee, Younghoon Lee, Nam-Chul Ha, Yong-Hak Kim, Stanley N. Cohen and Kangseok Lee
   Pages 1022 - 1034
  http://dx.doi.org/10.4161/rna.8.6.18063
Abstract  View Article
Transcriptional gene silencing of HIV-1 through promoter targeted RNA is highly specific
  Kazuo Suzuki, Takaomi Ishida, Makoto Yamagishi, Chantelle Ahlenstiel, Sanjay Swaminathan, Katharine Marks, Daniel Murray, Erin M McCartney, Michael R Beard, Marina Alexander, Damian F.J. Purcell, David A Cooper, Toshiki Watanabe and Anthony D Kelleher
   Pages 1035 - 1046
  http://dx.doi.org/10.4161/rna.8.6.16264
Abstract  View Article
Multiple RNA binding domains of Bruno confer recognition of diverse binding sites for translational repression
  Brad Reveal, Carlos Garcia, Andrew Ellington and Paul Macdonald
   Pages 1047 - 1060
  http://dx.doi.org/10.4161/rna.8.6.17542
Abstract  View Article
Differential effects of PKA-controlled CaMKK2 variants on neuronal differentiation
  Wenguang Cao, Muhammad Sohail, Guodong Liu, Geremy A. Koumbadinga, Vincent G. Lobo and Jiuyong Xie
   Pages 1061 - 1072
  http://dx.doi.org/10.4161/rna.8.6.16691
Abstract  View Article
Distinct activities of several RNase J proteins in methanogenic archaea
  Shiri Levy, Victoria Portnoy, Jasmine Admon and Gadi Schuster
   Pages 1073 - 1083
  http://dx.doi.org/10.4161/rna.8.6.16604
Abstract  View Article
7SK snRNA-mediated, gene-specific cooperativity of HMGA1 and P-TEFb
  Sebastian Eilebrecht, Bernd-Joachim Benecke and Arndt Benecke
   Pages 1084 - 1093
  http://dx.doi.org/10.4161/rna.8.6.17015
Abstract  View Article
Abundant class of non-coding RNA regulates development in the social amoeba Dictyostelium discoideum
  Lotta Avesson, Heiko T Schumacher, Pierre Fechter, Pascale Romby, Ulf Hellman and Fredrik Söderbom
   Pages 1094 - 1104
  http://dx.doi.org/10.4161/rna.8.6.17214
Abstract  View Article
Role of pri-miRNA tertiary structure in miR-17~92 miRNA biogenesis
  Steven G Chaulk, Gina L. Thede, Oliver A. Kent, Zhizhong Xu, Emily Gesner, Richard A. Veldhoen, Suneil K. Khanna, Ing Swie Goping, Andrew M. MacMillan, Joshua T. Mendell, Howard Young, Richard P. Fahlman and J.N. Mark Glover
   Pages 1105 - 1114
  http://dx.doi.org/10.4161/rna.8.6.17410
Abstract  View Article
Loop nucleotides control primary and mature miRNA function in target recognition and repression
  Si-Biao Yue, Robin Deis Trujillo, Yujie Tang, William E. O’Gorman and Chang-Zheng Chen
   Pages 1115 - 1123
  http://dx.doi.org/10.4161/rna.8.6.17626
Abstract  View Article
Construction of MicroRNA- and MicroRNA*-mediated regulatory networks in plants
  Yijun Meng, Chaogang Shao, Lingfeng Gou, Yongfeng Jin and Ming Chen
   Pages 1124 - 1148
  http://dx.doi.org/10.4161/rna.8.6.17743
Abstract  View Article
Argonaute proteins regulate microRNA stability: Increased microRNA abundance by Argonaute proteins is due to microRNA stabilization
  Julia Winter and Sven Diederichs
   Pages 1149 - 1157
  http://dx.doi.org/10.4161/rna.8.6.17665
Abstract  View Article
The nucleolar protein Nop19p interacts preferentially with Utp25p and Dhr2p and is essential for the production of the 40S ribosomal subunit in Saccharomyces cerevisiae
  Elodie Choque, Marlène Marcellin, Odile Burlet-Schiltz, Olivier Gadal and Christophe Dez
   Pages 1158 - 1172
  http://dx.doi.org/10.4161/rna.8.6.17699
Abstract  View Article
Quantitative mass spectrometry of DENV-2 RNA-interacting proteins reveals that the DEAD-box RNA helicase DDX6 binds the DB1 and DB2 3’ UTR structures
  Alex Michael Ward, Katell Bidet, Ang Yinglin, Siok Ghee Ler, Kelly Hogue, Walter Blackstock, Jayantha Gunaratne and Mariano A. Garcia-Blanco
   Pages 1173 - 1186
  http://dx.doi.org/10.4161/rna.8.6.17836
Abstract  View Article