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Noncoding RNAs: Molecular Biology and Molecular Medicine


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Jan Barciszewski
Institute of Bioorganic Chemistry of the Polish Academy of Sciences

Volker A. Erdmann
Freie Universitat-Berlin


ISBN: 978-0-306-47835-2
Pub date: 2003-08-15
292 pages


About this book

General inspection of a role performed in the cell by RNAs allows us to distinguish three major groups of transcripts: i) protein-coding mRNAs and ii) non-coding housekeeping and iii) regulatory RNAs.

The housekeeping RNAs include RNA classes that are generally, constitutively expressed and whose presence is required for normal function and viability of the cells. On the other hand, a group of regulatory RNAs includes RNA species that are expressed at certain stages of organism development or cell differentiation or as a response to external stimuli and can affect expression of other genes on the levels of transcription or translation.

Noncoding RNA transcripts form a heterogeneous class of RNAs that can not be characterized by a single specific function. Initially, the term noncoding RNA (ncRNA) was used primarily to describe polyadenylated and a capped eukaryotic RNAs transcribed by RNA polymerase II, but lacking long open reading frames. Now, this definition can be extended to cover all RNA transcripts that do not show protein-coding capacity and is sometimes used to describe any RNA that does not encode protein, including introns.

This book is an in-depth look at the function of NonCoding RNAs and their relationship to molecular biology and molecular biology. This is the first book on the subject to be published.

Table of contents

Riboregulators and Overview
Maciej Szymanski, Volker A. Erdmann and Jan Barciszewski

Introns and Noncoding RNAs the Hidden Layer of Eukaryotic Complexity
John S. Mattick

Computational Gene-Finding for Noncoding RNAs
Peter Schattner

Xist RNA Associates with Chromatin and Causes Gene Silencing
Anton Wutz

Dosage Compensation in Drosophilae a Ribonucleoprotein Complex Mediates Transcriptional Up-Regulation
Diane Kindel and Hubert Amrein

The Structure Regulation and Function of the Imprinted H19 RNA
Raluca I. Verona and Marisa S. Bartolomei

MicroRNAs
Eric G. Moss

Short Interfering and Micro RNAs Tiny but Mighty
Martin Tabler, Alexandra Boutla, Kriton Kalantidis and Mina Tsagris

Post-Transcriptional Gene Silencing in Plants
Matthew A. Escobar and Abhaya M. Dandekar

RNA-Directed DNA Methylation and Chromatin Modifications
Marjori A. Matzke, M. Florian Mette, Tatsuo Kanno, István Papp, Werner Aufsatz and Atntonius J.M. Matzke

Brain-Specific Nonmessenger RNAs
Jürgen Brosius, Alexander Hüttenhofer and Henri Tiedge

New Frontiers for the snoRNA World
Jean-Pierre Bachellerie and Jérôme Cavaillé

New Perspectives on Noncoding or Short ORF-Encoding RNAs in Plants
Martin Crespi, Anna Campalans, Claude Thermes and Adam Kondorosi

The Noncoding Developmentally Active and Stress Inducible hsrw Gene of Drosophilae Melanogaster Integrates Post-Transcriptional Processing of Other Nuclear
Subhash C. Lakhotia

Adapt Gene RNA Transcripts as Riboregulators
Dana R. Crawford and Kelvin J. A. Davies

RNA Pathogenesis in Dominant Noncoding Microsatellite Expansion Disorders
Laura P.W. Ranum and John W. Day

Noncoding RNAs Encoded by Bacterial Chromosomes
E. Gerhart H. Wagner and Jörg Vogel

We are Legion Noncoding Regulatory RNAs and Hfq
Cristin C. Brescia and Darren D. Sledjeski